How to use SOAPdenovo-fusion scaffold the output of MEGAHIT? · Issue #26 · aquaskyline/SOAPdenovo2 · GitHub
Recas - Software Tools
GitHub - aquaskyline/SOAPdenovo-Trans: SOAPdenovo-Trans, a de novo transcriptome assembler designed specifically for RNA-Seq. We evaluated its performance on transcriptome datasets from rice and mouse.
De Novo Transcriptome Assembly (A and B) SOAPdenovo assemblies were... | Download Scientific Diagram
SOAPdenovo recipes
Results
Comparison of SOAPdenovo and Trinity assembly results | Download Table
De novo whole genome assembly
Assembler for de novo assembly of large genomes | PNAS
Assembly of Ariolimax dolichophallus using SOAPdenovo2
SOAPdenovo-Trans | Bioinformatic Tools
GitHub - aquaskyline/SOAPdenovo2: Next generation sequencing reads de novo assembler.
GitHub - cboursnell/SOAPdenovo-Trans: A fork of SOAPdenovo-Trans
SOAPdenovo-Trans: De novo transcriptome assembly with short RNA-Seq reads
N50 value for the genomes assembled by Velvet, SOAPdenovo, ABySS,... | Download Scientific Diagram
The assembled NGA50 contig size in kilo-bases for SOAPdenovo. The “-d0”... | Download Table
Comparison of read coverage between the assembly from SOAPdenovo and... | Download Scientific Diagram
Here, researchers from BGI Shenzhen, present SOAPdenovo-Trans, a de novo transcriptome assembler designed specifically for RNA-… | Map reading, Reading, Short reads
Comparison of SOAPdenovo and Trinity assembly results | Download Table
An Integrated Pipeline for de Novo Assembly of Microbial Genomes | PLOS ONE
Comparison of ABySS and SOAPdenovo programs | Download Table
SOAPdenovo-fusionを使ってmegahit アセンブリのscaffoldingを行う - macでインフォマティクス
Benchmarking of Trans-ABySS, IDBA-tran, SOAPdenovo-Trans, | Download Table
A pipeline for completing bacterial genomes using in silicoand wet lab approaches | BMC Genomics | Full Text
not able install SOAPdenovo-Trans? · Issue #15 · aquaskyline/SOAPdenovo-Trans · GitHub
SOAPdenovo-fusion (command not found...) · Issue #49 · aquaskyline/SOAPdenovo2 · GitHub
